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Predictive molecular pathology in the time of coronavirus disease (COVID-19) in Europe.

Identifieur interne : 000903 ( Main/Exploration ); précédent : 000902; suivant : 000904

Predictive molecular pathology in the time of coronavirus disease (COVID-19) in Europe.

Auteurs : Umberto Malapelle [Italie] ; Pasquale Pisapia [Italie] ; Antonino Iaccarino [Italie] ; Massimo Barberis [Italie] ; Claudio Bellevicine [Italie] ; Hans Brunnström [Suède] ; Dario De Biase [Italie] ; Giovanna De Maglio [Italie] ; Kajsa Ericson Lindquist [Suède] ; Matteo Fassan [Italie] ; Gabriella Fontanini [Italie] ; Elisa Gruppioni [Italie] ; Paul Hofman [France] ; Sabine Merkelbach-Bruse [Allemagne] ; Miguel A. Molina Vila [Espagne] ; Anaïs Pujals [France] ; Ida Rapa [Italie] ; Luisella Righi [Italie] ; Rafael Rosell [Espagne] ; Oliver Schildgen [Allemagne] ; Verena Schildgen [Allemagne] ; Fernando C. Schmitt [Portugal] ; Giovanni Tallini [Italie] ; Sara Vander Borght [Belgique] ; Elena Vigliar [Italie] ; Marco Volante [Italie] ; Svenja Wagener-Ryczek [Allemagne] ; Birgit Weynand [Belgique] ; Giancarlo Troncone [Italie]

Source :

RBID : pubmed:32737190

Abstract

AIMS

Lung cancer predictive biomarker testing is essential to select advanced-stage patients for targeted treatments and should be carried out without delays even during health emergencies, such as the coronavirus (COVID-19) outbreak.

METHODS

Fifteen molecular laboratories from seven different European countries compared 4 weeks of national lockdown to a corresponding period in 2019, in terms of tissue and/or plasma-based molecular test workload, analytical platforms adopted, number of cases undergoing programmed death-ligand1 (PD-L1) expression assessment and DNA-based molecular tests turnaround time.

RESULTS

In most laboratories (80.0%), tissue-based molecular test workload was reduced. In 40.0% of laboratories (6/15), the decrease was >25%, and in one, reduction was as high as 80.0%. In this instance, a concomitant increase in liquid biopsy was reported (60.0%). Remarkably, in 33.3% of the laboratories, real-time PCR (RT-PCR)-based methodologies increased, whereas highly multiplexing assays approaches decreased. Most laboratories (88.9%) did not report significant variations in PD-L1 volume testing.

CONCLUSIONS

The workload of molecular testing for patients with advanced-stage lung cancer during the lockdown showed little variations. Local strategies to overcome health emergency-related issues included the preference for RT-PCR tissue-based testing methodologies and, occasionally, for liquid biopsy.


DOI: 10.1136/jclinpath-2020-206957
PubMed: 32737190
PubMed Central: PMC7397978


Affiliations:


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<country xml:lang="fr">Italie</country>
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<name sortKey="De Maglio, Giovanna" sort="De Maglio, Giovanna" uniqKey="De Maglio G" first="Giovanna" last="De Maglio">Giovanna De Maglio</name>
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<name sortKey="Ericson Lindquist, Kajsa" sort="Ericson Lindquist, Kajsa" uniqKey="Ericson Lindquist K" first="Kajsa" last="Ericson Lindquist">Kajsa Ericson Lindquist</name>
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<country xml:lang="fr">Suède</country>
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</author>
<author>
<name sortKey="Fassan, Matteo" sort="Fassan, Matteo" uniqKey="Fassan M" first="Matteo" last="Fassan">Matteo Fassan</name>
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<nlm:affiliation>Surgical Pathology Unit, Department of Medicine, University of Padua, Padua, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Surgical Pathology Unit, Department of Medicine, University of Padua, Padua</wicri:regionArea>
<wicri:noRegion>Padua</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Fontanini, Gabriella" sort="Fontanini, Gabriella" uniqKey="Fontanini G" first="Gabriella" last="Fontanini">Gabriella Fontanini</name>
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<nlm:affiliation>Department of Surgical, Medical, and Molecular Pathology and Critical Area, University of Pisa, Pisa, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Department of Surgical, Medical, and Molecular Pathology and Critical Area, University of Pisa, Pisa</wicri:regionArea>
<placeName>
<settlement type="city">Pise</settlement>
<region nuts="2">Toscane</region>
</placeName>
<orgName type="university">Université de Pise</orgName>
</affiliation>
</author>
<author>
<name sortKey="Gruppioni, Elisa" sort="Gruppioni, Elisa" uniqKey="Gruppioni E" first="Elisa" last="Gruppioni">Elisa Gruppioni</name>
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<nlm:affiliation>Department of Pathology, University of Bologna Medical Center, Bologna, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Department of Pathology, University of Bologna Medical Center, Bologna</wicri:regionArea>
<wicri:noRegion>Bologna</wicri:noRegion>
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<author>
<name sortKey="Hofman, Paul" sort="Hofman, Paul" uniqKey="Hofman P" first="Paul" last="Hofman">Paul Hofman</name>
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<nlm:affiliation>Pathology, INSERM, Nice, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>Pathology, INSERM, Nice</wicri:regionArea>
<placeName>
<region type="region">Provence-Alpes-Côte d'Azur</region>
<region type="old region">Provence-Alpes-Côte d'Azur</region>
<settlement type="city">Nice</settlement>
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</author>
<author>
<name sortKey="Merkelbach Bruse, Sabine" sort="Merkelbach Bruse, Sabine" uniqKey="Merkelbach Bruse S" first="Sabine" last="Merkelbach-Bruse">Sabine Merkelbach-Bruse</name>
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<nlm:affiliation>Institute of Pathology, University of Cologne, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Institute of Pathology, University of Cologne, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
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<author>
<name sortKey="Molina Vila, Miguel A" sort="Molina Vila, Miguel A" uniqKey="Molina Vila M" first="Miguel A" last="Molina Vila">Miguel A. Molina Vila</name>
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<nlm:affiliation>Laboratory of Oncology, Pangaea Oncology, Barcelona, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>Laboratory of Oncology, Pangaea Oncology, Barcelona</wicri:regionArea>
<placeName>
<settlement type="city">Barcelone</settlement>
<region nuts="2" type="region">Catalogne</region>
</placeName>
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<author>
<name sortKey="Pujals, Anais" sort="Pujals, Anais" uniqKey="Pujals A" first="Anaïs" last="Pujals">Anaïs Pujals</name>
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<nlm:affiliation>Department of Pathology, CHU Henri Mondor, Creteil, France.</nlm:affiliation>
<country xml:lang="fr">France</country>
<wicri:regionArea>Department of Pathology, CHU Henri Mondor, Creteil</wicri:regionArea>
<placeName>
<region type="region">Île-de-France</region>
<region type="old region">Île-de-France</region>
<settlement type="city">Créteil</settlement>
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<author>
<name sortKey="Rapa, Ida" sort="Rapa, Ida" uniqKey="Rapa I" first="Ida" last="Rapa">Ida Rapa</name>
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<nlm:affiliation>Pathology Unit, Department of Oncology, San Luigi Gonzaga Hospital, Orbassano, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Pathology Unit, Department of Oncology, San Luigi Gonzaga Hospital, Orbassano</wicri:regionArea>
<wicri:noRegion>Orbassano</wicri:noRegion>
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<name sortKey="Righi, Luisella" sort="Righi, Luisella" uniqKey="Righi L" first="Luisella" last="Righi">Luisella Righi</name>
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<nlm:affiliation>Pathology Unit, Department of Oncology, University of Turin, Turin, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Pathology Unit, Department of Oncology, University of Turin, Turin</wicri:regionArea>
<placeName>
<settlement type="city">Turin</settlement>
<region type="région" nuts="2">Piémont</region>
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<name sortKey="Rosell, Rafael" sort="Rosell, Rafael" uniqKey="Rosell R" first="Rafael" last="Rosell">Rafael Rosell</name>
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<nlm:affiliation>Cancer Biology and Precision Medicine Program, Catalan Institute of Oncology; Germans Trias i Pujol Health Sciences Institute and Hospital Badalona, Barcelona, Spain.</nlm:affiliation>
<country xml:lang="fr">Espagne</country>
<wicri:regionArea>Cancer Biology and Precision Medicine Program, Catalan Institute of Oncology; Germans Trias i Pujol Health Sciences Institute and Hospital Badalona, Barcelona</wicri:regionArea>
<placeName>
<settlement type="city">Barcelone</settlement>
<region nuts="2" type="region">Catalogne</region>
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<author>
<name sortKey="Schildgen, Oliver" sort="Schildgen, Oliver" uniqKey="Schildgen O" first="Oliver" last="Schildgen">Oliver Schildgen</name>
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<nlm:affiliation>Institute of Pathology, Hospital of the Private University Witten/Herdecke, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Institute of Pathology, Hospital of the Private University Witten/Herdecke, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
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<author>
<name sortKey="Schildgen, Verena" sort="Schildgen, Verena" uniqKey="Schildgen V" first="Verena" last="Schildgen">Verena Schildgen</name>
<affiliation wicri:level="1">
<nlm:affiliation>Institute of Pathology, Hospital of the Private University Witten/Herdecke, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Institute of Pathology, Hospital of the Private University Witten/Herdecke, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Schmitt, Fernando C" sort="Schmitt, Fernando C" uniqKey="Schmitt F" first="Fernando C" last="Schmitt">Fernando C. Schmitt</name>
<affiliation wicri:level="1">
<nlm:affiliation>Pathology, IPATIMUP and Medical Faculty of Porto, Porto, Portugal.</nlm:affiliation>
<country xml:lang="fr">Portugal</country>
<wicri:regionArea>Pathology, IPATIMUP and Medical Faculty of Porto, Porto</wicri:regionArea>
<wicri:noRegion>Porto</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Tallini, Giovanni" sort="Tallini, Giovanni" uniqKey="Tallini G" first="Giovanni" last="Tallini">Giovanni Tallini</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Pathology, University of Bologna Medical Center, Bologna, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Department of Pathology, University of Bologna Medical Center, Bologna</wicri:regionArea>
<wicri:noRegion>Bologna</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Vander Borght, Sara" sort="Vander Borght, Sara" uniqKey="Vander Borght S" first="Sara" last="Vander Borght">Sara Vander Borght</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Pathology, University Hospitals Leuven, Leuven, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Department of Pathology, University Hospitals Leuven, Leuven</wicri:regionArea>
<wicri:noRegion>Leuven</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Vigliar, Elena" sort="Vigliar, Elena" uniqKey="Vigliar E" first="Elena" last="Vigliar">Elena Vigliar</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Public Health, University of Naples Federico II, Naples, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Department of Public Health, University of Naples Federico II, Naples</wicri:regionArea>
<wicri:noRegion>Naples</wicri:noRegion>
</affiliation>
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<author>
<name sortKey="Volante, Marco" sort="Volante, Marco" uniqKey="Volante M" first="Marco" last="Volante">Marco Volante</name>
<affiliation wicri:level="3">
<nlm:affiliation>Pathology Unit, Department of Oncology, University of Turin, Turin, Italy.</nlm:affiliation>
<country xml:lang="fr">Italie</country>
<wicri:regionArea>Pathology Unit, Department of Oncology, University of Turin, Turin</wicri:regionArea>
<placeName>
<settlement type="city">Turin</settlement>
<region type="région" nuts="2">Piémont</region>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Wagener Ryczek, Svenja" sort="Wagener Ryczek, Svenja" uniqKey="Wagener Ryczek S" first="Svenja" last="Wagener-Ryczek">Svenja Wagener-Ryczek</name>
<affiliation wicri:level="1">
<nlm:affiliation>Institute of Pathology, University of Cologne, Cologne, Germany.</nlm:affiliation>
<country xml:lang="fr">Allemagne</country>
<wicri:regionArea>Institute of Pathology, University of Cologne, Cologne</wicri:regionArea>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
<wicri:noRegion>Cologne</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Weynand, Birgit" sort="Weynand, Birgit" uniqKey="Weynand B" first="Birgit" last="Weynand">Birgit Weynand</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Pathology, University Hospitals Leuven, Leuven, Belgium.</nlm:affiliation>
<country xml:lang="fr">Belgique</country>
<wicri:regionArea>Department of Pathology, University Hospitals Leuven, Leuven</wicri:regionArea>
<wicri:noRegion>Leuven</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Troncone, Giancarlo" sort="Troncone, Giancarlo" uniqKey="Troncone G" first="Giancarlo" last="Troncone">Giancarlo Troncone</name>
<affiliation wicri:level="1">
<nlm:affiliation>Department of Public Health, University of Naples Federico II, Naples, Italy giancarlo.troncone@unina.it.</nlm:affiliation>
<country wicri:rule="url">Italie</country>
<wicri:regionArea>Department of Public Health, University of Naples Federico II, Naples</wicri:regionArea>
<wicri:noRegion>Naples</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series>
<title level="j">Journal of clinical pathology</title>
<idno type="eISSN">1472-4146</idno>
<imprint>
<date when="2020" type="published">2020</date>
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<front>
<div type="abstract" xml:lang="en">
<p>
<b>AIMS</b>
</p>
<p>Lung cancer predictive biomarker testing is essential to select advanced-stage patients for targeted treatments and should be carried out without delays even during health emergencies, such as the coronavirus (COVID-19) outbreak.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>METHODS</b>
</p>
<p>Fifteen molecular laboratories from seven different European countries compared 4 weeks of national lockdown to a corresponding period in 2019, in terms of tissue and/or plasma-based molecular test workload, analytical platforms adopted, number of cases undergoing programmed death-ligand1 (PD-L1) expression assessment and DNA-based molecular tests turnaround time.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>RESULTS</b>
</p>
<p>In most laboratories (80.0%), tissue-based molecular test workload was reduced. In 40.0% of laboratories (6/15), the decrease was >25%, and in one, reduction was as high as 80.0%. In this instance, a concomitant increase in liquid biopsy was reported (60.0%). Remarkably, in 33.3% of the laboratories, real-time PCR (RT-PCR)-based methodologies increased, whereas highly multiplexing assays approaches decreased. Most laboratories (88.9%) did not report significant variations in PD-L1 volume testing.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>CONCLUSIONS</b>
</p>
<p>The workload of molecular testing for patients with advanced-stage lung cancer during the lockdown showed little variations. Local strategies to overcome health emergency-related issues included the preference for RT-PCR tissue-based testing methodologies and, occasionally, for liquid biopsy.</p>
</div>
</front>
</TEI>
<pubmed>
<MedlineCitation Status="Publisher" Owner="NLM">
<PMID Version="1">32737190</PMID>
<DateRevised>
<Year>2020</Year>
<Month>08</Month>
<Day>05</Day>
</DateRevised>
<Article PubModel="Print-Electronic">
<Journal>
<ISSN IssnType="Electronic">1472-4146</ISSN>
<JournalIssue CitedMedium="Internet">
<PubDate>
<Year>2020</Year>
<Month>Jul</Month>
<Day>31</Day>
</PubDate>
</JournalIssue>
<Title>Journal of clinical pathology</Title>
<ISOAbbreviation>J. Clin. Pathol.</ISOAbbreviation>
</Journal>
<ArticleTitle>Predictive molecular pathology in the time of coronavirus disease (COVID-19) in Europe.</ArticleTitle>
<ELocationID EIdType="pii" ValidYN="Y">jclinpath-2020-206957</ELocationID>
<ELocationID EIdType="doi" ValidYN="Y">10.1136/jclinpath-2020-206957</ELocationID>
<Abstract>
<AbstractText Label="AIMS" NlmCategory="OBJECTIVE">Lung cancer predictive biomarker testing is essential to select advanced-stage patients for targeted treatments and should be carried out without delays even during health emergencies, such as the coronavirus (COVID-19) outbreak.</AbstractText>
<AbstractText Label="METHODS" NlmCategory="METHODS">Fifteen molecular laboratories from seven different European countries compared 4 weeks of national lockdown to a corresponding period in 2019, in terms of tissue and/or plasma-based molecular test workload, analytical platforms adopted, number of cases undergoing programmed death-ligand1 (PD-L1) expression assessment and DNA-based molecular tests turnaround time.</AbstractText>
<AbstractText Label="RESULTS" NlmCategory="RESULTS">In most laboratories (80.0%), tissue-based molecular test workload was reduced. In 40.0% of laboratories (6/15), the decrease was >25%, and in one, reduction was as high as 80.0%. In this instance, a concomitant increase in liquid biopsy was reported (60.0%). Remarkably, in 33.3% of the laboratories, real-time PCR (RT-PCR)-based methodologies increased, whereas highly multiplexing assays approaches decreased. Most laboratories (88.9%) did not report significant variations in PD-L1 volume testing.</AbstractText>
<AbstractText Label="CONCLUSIONS" NlmCategory="CONCLUSIONS">The workload of molecular testing for patients with advanced-stage lung cancer during the lockdown showed little variations. Local strategies to overcome health emergency-related issues included the preference for RT-PCR tissue-based testing methodologies and, occasionally, for liquid biopsy.</AbstractText>
<CopyrightInformation>© Author(s) (or their employer(s)) 2020. No commercial re-use. See rights and permissions. Published by BMJ.</CopyrightInformation>
</Abstract>
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<AffiliationInfo>
<Affiliation>Department of Public Health, University of Naples Federico II, Naples, Italy.</Affiliation>
</AffiliationInfo>
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